Other Software

Java Molecular Viewer for use with Protomol, the open-source molecular dynamics package from the LCLS
group at Notre Dame University. The code uses the JOGL OpenGL bindings, and requires Java 1.6 or above. It adds real-time viewing capability to the simulation, by communicating with the inbuilt Protomol sockets server. A number of molecular representations are provided, along with querying of individual atom information. To run from the command line use "java -jar -Djava.library.path=./ JMV.jar".

Example code for implementing a simple Gravitational model, where the orbiting body can be wrapped in a bitmap can be downloaded here for either Microsoft Windows or Linux. The code uses the Trolltech QT libraries, the basis for the KDE desktop.